Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 47 curated entries in PaperBLAST's database that match '4.3.1.17' as complete word(s).
These curated entries have 32 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS21785: L-serine ammonia-lyase is similar to: | PaperBLAST |
Pf6N2E2_5557: L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens | 51% id, 99% cov |
Q5ZXE1: L-serine ammonia-lyase (EC 4.3.1.17) from Legionella pneumophila | 50% id, 100% cov |
AO353_15500: L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens | 48% id, 100% cov |
| CA265_RS15860: threonine dehydratase is similar to: | PaperBLAST |
TDCB_ECOLI / P0AGF6: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Escherichia coli | 40% id, 95% cov |
TDCB_SALTY / P11954: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Salmonella typhimurium | 40% id, 95% cov |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 37% id, 94% cov |
| CA265_RS14425: 1-aminocyclopropane-1-carboxylate deaminase is similar to: | PaperBLAST |
O57809: L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii | 34% id, 88% cov |
| CA265_RS13740: cysteine synthase is similar to: | PaperBLAST |
SDSL_MOUSE / Q8R238: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; SDH; EC 4.3.1.17; EC 4.3.1.19 from Mus musculus | 27% id, 81% cov |
SDSL_HUMAN / Q96GA7: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; Serine dehydratase 2; SDH 2; EC 4.3.1.19; EC 4.3.1.17 from Homo sapiens | 26% id, 85% cov |
SRR_HUMAN / Q9GZT4: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Homo sapiens | 23% id, 80% cov |
| CA265_RS10150: cysteine synthase B is similar to: | PaperBLAST |
SRR_MOUSE / Q9QZX7: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Mus musculus | 22% id, 82% cov |
SRR_HUMAN / Q9GZT4: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Homo sapiens | 21% id, 82% cov |
SRR_RAT / Q76EQ0: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Rattus norvegicus | 23% id, 60% cov |
| CA265_RS05020: tryptophan synthase subunit beta is similar to: | PaperBLAST |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 23% id, 47% cov |
| CA265_RS04375: cystathionine beta-synthase is similar to: | PaperBLAST |
TD2_SOLLC / P25306: Threonine dehydratase 2 biosynthetic, chloroplastic; SlTD2; Threonine deaminase 2; EC 4.3.1.17; EC 4.3.1.19 from Solanum lycopersicum | 23% id, 43% cov |
B1N2N4: L-serine ammonia-lyase (EC 4.3.1.17) from Entamoeba histolytica | 33% id, 23% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory