Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 23 curated entries in PaperBLAST's database that match '4.3.1.3' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS22270: histidine ammonia-lyase
is similar to:
PaperBLAST

CA265_RS22270: Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp.

100% id,
100% cov

Sama_1631: Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis

55% id,
98% cov

BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans

44% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory