Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 11 curated entries in PaperBLAST's database that match '5.1.3.29' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS04210: hypothetical protein is similar to: | PaperBLAST |
SM_b21108: L-fucose mutarotase (EC 5.1.3.29) from Sinorhizobium meliloti | 56% id, 98% cov |
| CA265_RS08345: L-fucose mutarotase is similar to: | PaperBLAST |
FUCM_XANCP / Q8P3K1: L-fucose mutarotase; Fucose 1-epimerase; Type-2 mutarotase; EC 5.1.3.29 from Xanthomonas campestris | 46% id, 89% cov |
BT1276: L-fucose mutarotase FucU (EC 5.1.3.29) from Bacteroides thetaiotaomicron | 48% id, 85% cov |
| CA265_RS13790: L-rhamnose mutarotase is similar to: | PaperBLAST |
SM_b21108: L-fucose mutarotase (EC 5.1.3.29) from Sinorhizobium meliloti | 28% id, 99% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2067647-2068015 (frame -2) on NZ_CP021237 is similar to: | PaperBLAST |
BT1276: L-fucose mutarotase FucU (EC 5.1.3.29) from Bacteroides thetaiotaomicron | 45% id, 95% cov |
Lawrence Berkeley National Laboratory