Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 42 curated entries in PaperBLAST's database that match '5.3.1.4' as complete word(s).

These curated entries have 36 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS08615: L-arabinose isomerase
is similar to:
PaperBLAST

CA265_RS08615: L-arabinose isomerase (EC 5.3.1.4) from Pedobacter sp.

100% id,
100% cov

Echvi_1879: L-arabinose isomerase (EC 5.3.1.4) from Echinicola vietnamensis

72% id,
99% cov

F6KRI7: L-arabinose isomerase (EC 5.3.1.4) from Anoxybacillus flavithermus

59% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory