Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 34 curated entries in PaperBLAST's database that match '5.3.1.8' as complete word(s).
These curated entries have 28 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS13185: phosphoglucosamine mutase is similar to: | PaperBLAST |
ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii | 33% id, 97% cov |
| CA265_RS08895: mannose-1-phosphate guanylyltransferase is similar to: | PaperBLAST |
PH0925 / O58649: GDP-D-mannose pyrophosphorylase (EC 2.7.7.13; EC 5.3.1.8) from Pyrococcus horikoshii | 35% id, 75% cov |
algA / GI|31296823: alginate biosynthesis protein AlgA; EC 2.7.7.13; EC 5.3.1.8 from Pseudomonas fluorescens | 34% id, 72% cov |
ALGA_PSEAE / P07874: Alginate biosynthesis protein AlgA; EC 5.3.1.8; EC 2.7.7.13 from Pseudomonas aeruginosa | 34% id, 72% cov |
| CA265_RS19200: mannose-1-phosphate guanylyltransferase is similar to: | PaperBLAST |
PH0925 / O58649: GDP-D-mannose pyrophosphorylase (EC 2.7.7.13; EC 5.3.1.8) from Pyrococcus horikoshii | 36% id, 72% cov |
ALGA_PSEAE / P07874: Alginate biosynthesis protein AlgA; EC 5.3.1.8; EC 2.7.7.13 from Pseudomonas aeruginosa | 34% id, 71% cov |
algA / GI|31296823: alginate biosynthesis protein AlgA; EC 2.7.7.13; EC 5.3.1.8 from Pseudomonas fluorescens | 33% id, 71% cov |
| CA265_RS01270: hypothetical protein is similar to: | PaperBLAST |
MANA1_BACSU / O31646: Mannose-6-phosphate isomerase ManA; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis | 24% id, 97% cov |
A4ITT1: mannose-6-phosphate isomerase (EC 5.3.1.8) from Geobacillus thermodenitrificans | 22% id, 96% cov |
Q9AGZ4: mannose-6-phosphate isomerase (EC 5.3.1.8) from Bacillus subtilis | 22% id, 97% cov |
| CA265_RS09660: phosphoglucomutase is similar to: | PaperBLAST |
ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii | 25% id, 81% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory