Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 12 curated entries in PaperBLAST's database that match '5.3.2.6' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS13720: 4-oxalocrotonate tautomerase
is similar to:
PaperBLAST

4OT1_PSEPU / Q01468: 2-hydroxymuconate tautomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Pseudomonas putida
xylH / Q01468: 4-oxalocrotonate tautomerase subunit (EC 5.3.2.6) from Pseudomonas putida
Q01468: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas putida

34% id,
100% cov

P49172: 2-hydroxymuconate tautomerase (EC 5.3.2.6) from Pseudomonas sp.

31% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory