Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 8 curated entries in PaperBLAST's database that match '5.5.1.1' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS20105: dipeptide epimerase is similar to: | PaperBLAST |
CATB_PSEPU / P08310: Muconate cycloisomerase 1; Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I; EC 5.5.1.1 from Pseudomonas putida | 29% id, 91% cov |
PS417_23670: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas simiae | 29% id, 92% cov |
Q4K9X1: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas fluorescens | 28% id, 91% cov |
| CA265_RS12250: enolase is similar to: | PaperBLAST |
PS417_23670: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas simiae | 27% id, 95% cov |
catB / A0F0B3: muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas reinekei | 27% id, 94% cov |
Q4K9X1: Muconate cycloisomerase (EC 5.5.1.1) from Pseudomonas fluorescens | 25% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory