Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 4 curated entries in PaperBLAST's database that match '3-isopropylmalate dehydratase%LeuD' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS15840: 3-isopropylmalate dehydratase small subunit is similar to: | PaperBLAST |
LeuD / b0071: 3-isopropylmalate dehydratase subunit LeuD (EC 4.2.1.33) from Escherichia coli | 48% id, 95% cov |
DVU2983: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 40% id, 74% cov |
2pkpA / Q58667: Crystal structure of 3-isopropylmalate dehydratase (leud)from methhanocaldococcus jannaschii dsm2661 (mj1271) | 36% id, 71% cov |
| CA265_RS16405: aconitate hydratase is similar to: | PaperBLAST |
DVU2983: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 44% id, 41% cov |
2pkpA / Q58667: Crystal structure of 3-isopropylmalate dehydratase (leud)from methhanocaldococcus jannaschii dsm2661 (mj1271) | 37% id, 40% cov |
LeuD / b0071: 3-isopropylmalate dehydratase subunit LeuD (EC 4.2.1.33) from Escherichia coli | 35% id, 31% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory