Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 3 curated entries in PaperBLAST's database that match 'IGP synthase, amidotransferase subunit' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS03620: imidazole glycerol phosphate synthase subunit HisH is similar to: | PaperBLAST |
DvMF_2305: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 39% id, 95% cov |
DVU0285: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 37% id, 94% cov |
HSERO_RS20325: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Herbaspirillum seropedicae | 36% id, 96% cov |
| CA265_RS19265: imidazole glycerol phosphate synthase subunit HisH is similar to: | PaperBLAST |
HSERO_RS20325: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Herbaspirillum seropedicae | 37% id, 98% cov |
DVU0285: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 37% id, 94% cov |
DvMF_2305: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 36% id, 96% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory