Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS06375: cystathionine gamma-synthase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 54% id,
99% cov

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 53% id,
99% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 54% id,
98% cov

More...

CA265_RS08190: cystathionine gamma-synthase
is similar to:		 PaperBLAST

CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum

 45% id,
97% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 44% id,
98% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 44% id,
98% cov

More...

CA265_RS13740: cysteine synthase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 41% id,
96% cov

CA265_RS13080: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 40% id,
94% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 40% id,
93% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 39% id,
93% cov

More...

CA265_RS04375: cystathionine beta-synthase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 40% id,
92% cov

CA265_RS10150: cysteine synthase B
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 39% id,
93% cov

CA265_RS08180: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 35% id,
98% cov

7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579

 34% id,
100% cov

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 34% id,
100% cov

More...

CA265_RS10820: IscS subfamily cysteine desulfurase
is similar to:		 PaperBLAST

CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens
P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens

 23% id,
85% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 27% id,
48% cov

CA265_RS07515: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

CGL_HUMAN / P32929: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Homo sapiens
P32929: cystathionine gamma-lyase (EC 4.4.1.1) from Homo sapiens

 29% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory