Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 5 curated entries in PaperBLAST's database that match '1.1.1.122' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c02510: S-(hydroxymethyl)glutathione dehydrogenase FrmA
is similar to:
PaperBLAST

Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus

29% id,
96% cov

PGA1_c34320: L-threonine 3-dehydrogenase Tdh
is similar to:
PaperBLAST

Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus

24% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory