Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 8 curated entries in PaperBLAST's database that match '1.1.1.140' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 19 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c15020: D-beta-hydroxybutyrate dehydrogenase BdhA
is similar to:
PaperBLAST

D4I194: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Erwinia amylovora

32% id,
98% cov

BWI76_RS22230: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

30% id,
98% cov

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

29% id,
98% cov

More...

PGA1_c13170: sorbitol dehydrogenase PolS
is similar to:
PaperBLAST

D4I194: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Erwinia amylovora

31% id,
98% cov

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

30% id,
97% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
97% cov

PGA1_c02060: short-chain dehydrogenase / reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
95% cov

PGA1_c23480: putative D-beta-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

31% id,
98% cov

BWI76_RS22230: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

31% id,
98% cov

D4I194: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Erwinia amylovora

30% id,
98% cov

More...

PGA1_c31980: short chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
97% cov

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

31% id,
97% cov

PGA1_c17930: 3-oxoacyl-[acyl-carrier-protein] reductase FabG
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

30% id,
97% cov

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

29% id,
98% cov

BWI76_RS22230: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

28% id,
98% cov

More...

PGA1_c29980: putative short chain dehydrogenase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

29% id,
98% cov

PGA1_c27390: short-chain dehydrogenase/reductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

28% id,
98% cov

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

27% id,
97% cov

D4I194: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Erwinia amylovora

27% id,
97% cov

More...

PGA1_c23090: putative acetoin(diacetyl) reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
97% cov

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

29% id,
94% cov

PGA1_c11320: 3-hydroxyacyl-CoA dehydrogenase type-2
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
97% cov

PGA1_c23120: putative sorbitol dehydrogenase
is similar to:
PaperBLAST

SRLD_ECOLI / P05707: Sorbitol-6-phosphate 2-dehydrogenase; Glucitol-6-phosphate dehydrogenase; Ketosephosphate reductase; EC 1.1.1.140 from Escherichia coli
GutD / b2705: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli
srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli
srlD / P05707: sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli

28% id,
97% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
97% cov

PGA1_c10000: short chain dehydrogenase / reductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

28% id,
98% cov

PGA1_c07370: putative short chain dehydrogenase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

27% id,
97% cov

PGA1_c08430: short chain dehydrogenase / reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
94% cov

PGA1_c07740: putative gluconate 5-dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

24% id,
99% cov

PGA1_c33460: oxidoreductase UcpA
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

30% id,
79% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
75% cov

PGA1_c01280: short-chain dehydrogenase/reductase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

27% id,
82% cov

PGA1_c27580: putative short chain dehydrogenase
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

22% id,
81% cov

PGA1_c04640: enoyl-[acyl-carrier-protein] reductase FabI
is similar to:
PaperBLAST

BWI76_RS01745: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Klebsiella michiganensis

21% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 18 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory