Curated BLAST for Genomes


Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 19 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c34320: L-threonine 3-dehydrogenase Tdh
is similar to:

M1PD_ALIF1 / Q5E1G4: Mannitol-1-phosphate 5-dehydrogenase; EC from Aliivibrio fischeri

25% id,
76% cov

PGA1_c29250: putative haloacid dehalogenase-like hydrolase
is similar to:

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC; mannitol-1-phosphatase (EC from Acinetobacter baylyi

29% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory