Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 64 curated entries in PaperBLAST's database that match '1.1.1.27' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c03650: malate dehydrogenase Mdh is similar to:	PaperBLAST
Q8I8U5: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria acervulina	52% id, 98% cov
Q27797: L-lactate dehydrogenase (EC 1.1.1.27) from Toxoplasma gondii	51% id, 97% cov
Q9GT92: L-lactate dehydrogenase (EC 1.1.1.27) from Cryptosporidium parvum	51% id, 96% cov
Q8I8U4: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria tenella	49% id, 98% cov
CH_024078: L-lactate dehydrogenase; EC 1.1.1.27 from Babesia bovis Q7Z0X7: L-lactate dehydrogenase (EC 1.1.1.27) from Babesia bovis	49% id, 96% cov
P90613: L-lactate dehydrogenase (EC 1.1.1.27) from Toxoplasma gondii	46% id, 98% cov
Q8I8U3: L-lactate dehydrogenase (EC 1.1.1.27) from Eimeria maxima	45% id, 97% cov
LDH: lactate dehydrogenase; EC 1.1.1.27 from Plasmodium falciparum LDH / GB\|ABA46354.1: lactate dehydrogenase; EC 1.1.1.27 from Plasmodium falciparum Q27743: L-lactate dehydrogenase (EC 1.1.1.27) from Plasmodium falciparum	44% id, 98% cov
LDH_PLABA / Q7SI97: L-lactate dehydrogenase; EC 1.1.1.27 from Plasmodium berghei	42% id, 99% cov
B9MKZ8: L-lactate dehydrogenase (EC 1.1.1.27) from Caldicellulosiruptor bescii	33% id, 100% cov
LDH_LACHE / O32765: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactobacillus helveticus	34% id, 96% cov
LDH_PEDAC / Q59645: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Pediococcus acidilactici	34% id, 93% cov
A0A1A6GB48: L-lactate dehydrogenase (EC 1.1.1.27) from Enterococcus mundtii	33% id, 97% cov
LDH_THEMA / P16115: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermotoga maritima	33% id, 95% cov
LDH_GEOSE / P00344: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Geobacillus stearothermophilus P00344: L-lactate dehydrogenase (EC 1.1.1.27) from Geobacillus stearothermophilus	33% id, 96% cov
LDH_BACSU / P13714: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Bacillus subtilis	33% id, 95% cov
LDH1_STAAC / Q5HJD7: L-lactate dehydrogenase 1; L-LDH 1; EC 1.1.1.27 from Staphylococcus aureus LDH1_STAAE / A6QDL6: L-lactate dehydrogenase 1; L-LDH 1; EC 1.1.1.27 from Staphylococcus aureus	33% id, 96% cov
ldh1: L-lactate dehydrogenase 1; EC 1.1.1.27 from Lactobacillus plantarum	33% id, 96% cov
W8CXQ9: L-lactate dehydrogenase (EC 1.1.1.27) from Bacillus coagulans	33% id, 96% cov
LDH2_STAAC / Q5HCV0: L-lactate dehydrogenase 2; L-LDH 2; EC 1.1.1.27 from Staphylococcus aureus LDH2_STAAE / A6QK89: L-lactate dehydrogenase 2; L-LDH 2; EC 1.1.1.27 from Staphylococcus aureus	32% id, 97% cov
LDH_LACPE / P56511: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactiplantibacillus pentosus ldh: L-lactate dehydrogenase; EC 1.1.1.27 from Lactobacillus pentosus	32% id, 96% cov
LDH_LACCA / P00343: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactobacillus casei ldh / P00343: L-lactate dehydrogenase subunit (EC 1.1.1.27) from Lactobacillus casei	33% id, 93% cov
LDH_DEIRA / P50933: L-lactate dehydrogenase; L-LDH; 2-ketoacid:NAD-dependent dehydrogenase; EC 1.1.1.27 from Deinococcus radiodurans	31% id, 98% cov
LDH_THET8 / Q5SJA1: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermus thermophilus	31% id, 97% cov
LDH_THEAQ / P13715: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermus aquaticus	30% id, 99% cov
LDH_LACLN / D8KFT1: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Lactococcus lactis	30% id, 98% cov
LDH_THECA / P06150: L-lactate dehydrogenase; L-LDH; EC 1.1.1.27 from Thermus caldophilus	30% id, 97% cov
B1A4R6: L-lactate dehydrogenase (EC 1.1.1.27) from Thermoanaerobacter ethanolicus	30% id, 98% cov
ldh / P78007: L-lactate dehydrogenase (EC 1.1.1.27) from Mycoplasma pneumoniae	29% id, 100% cov
ldh / P26283: L-lactate dehydrogenase subunit (EC 1.1.1.27) from Streptococcus mutans P26283: L-lactate dehydrogenase (EC 1.1.1.27) from Streptococcus mutans	31% id, 93% cov
E7CXT1: L-lactate dehydrogenase (EC 1.1.1.27) from Thermoanaerobacterium saccharolyticum	30% id, 98% cov
ldhA: L-lactate dehydrogenase 1; EC 1.1.1.27 from Lactococcus lactis	30% id, 94% cov
P00345: L-lactate dehydrogenase (EC 1.1.1.27) from Bacillus megaterium	30% id, 94% cov
Q0GND9: L-lactate dehydrogenase (EC 1.1.1.27) from Amblyrhynchus cristatus	29% id, 93% cov
Q0GND8: L-lactate dehydrogenase (EC 1.1.1.27) from Iguana iguana	29% id, 93% cov
LDH6A_HUMAN / Q6ZMR3: L-lactate dehydrogenase A-like 6A; LDHA-like protein 6A; EC 1.1.1.27 from Homo sapiens	29% id, 91% cov
More...

PGA1_c19350: putative aldehyde dehydrogenase is similar to:	PaperBLAST
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum	33% id, 53% cov

PGA1_c27200: alcohol dehydrogenase, iron containing is similar to:	PaperBLAST
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum	31% id, 47% cov

PGA1_c23360: putative iron containing alcohol dehydrogenase is similar to:	PaperBLAST
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum	32% id, 45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory