Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 24 curated entries in PaperBLAST's database that match '1.1.1.6' as complete word(s).
These curated entries have 15 distinct sequences.
Running ublast with E ≤ 0.01
Found 21 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c27390: short-chain dehydrogenase/reductase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 35% id, 97% cov |
| PGA1_c31980: short chain dehydrogenase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 35% id, 96% cov |
| PGA1_c13170: sorbitol dehydrogenase PolS is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 34% id, 94% cov |
| PGA1_c07740: putative gluconate 5-dehydrogenase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 32% id, 96% cov |
| PGA1_c27200: alcohol dehydrogenase, iron containing is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 32% id, 96% cov |
| PGA1_c23090: putative acetoin(diacetyl) reductase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 32% id, 96% cov |
| PGA1_c23360: putative iron containing alcohol dehydrogenase is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 32% id, 95% cov |
| PGA1_c29980: putative short chain dehydrogenase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 31% id, 96% cov |
| PGA1_c15020: D-beta-hydroxybutyrate dehydrogenase BdhA is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 31% id, 96% cov |
| PGA1_c17930: 3-oxoacyl-[acyl-carrier-protein] reductase FabG is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 31% id, 96% cov |
| PGA1_c23120: putative sorbitol dehydrogenase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 31% id, 95% cov |
| PGA1_c11320: 3-hydroxyacyl-CoA dehydrogenase type-2 is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 30% id, 96% cov |
| PGA1_c07370: putative short chain dehydrogenase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 30% id, 93% cov |
| PGA1_c02060: short-chain dehydrogenase / reductase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 29% id, 94% cov |
| PGA1_c33460: oxidoreductase UcpA is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 28% id, 95% cov |
| PGA1_c16810: enoyl-[acyl-carrier-protein] reductase FabI is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 27% id, 95% cov |
| PGA1_c03910: short chain dehydrogenase / reductase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 29% id, 88% cov |
| PGA1_c10650: putative short chain dehydrogenase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 25% id, 96% cov |
| PGA1_c04640: enoyl-[acyl-carrier-protein] reductase FabI is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 25% id, 95% cov |
| PGA1_c27580: putative short chain dehydrogenase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 30% id, 72% cov |
| PGA1_c01280: short-chain dehydrogenase/reductase is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 24% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 20 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1363071-1363886 (frame -1) on PGA1_c is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 33% id, 97% cov |
| 1561353-1562261 (frame +3) on PGA1_c is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 30% id, 98% cov |
| 3506072-3507046 (frame -2) on PGA1_c is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 28% id, 98% cov |
Lawrence Berkeley National Laboratory