Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 42 curated entries in PaperBLAST's database that match '1.1.99.2'.

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c35540: alcohol dehydrogenase AlkJ
is similar to:		 PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

 42% id,
95% cov

PDH1_AGACM / V5NDL4: Pyranose dehydrogenase; PDH; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Agaricus campestris
V5NDL4: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus campestris

 32% id,
57% cov

PDH1_LEUMG / Q3L245: Pyranose dehydrogenase 1; PDH 1; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Leucoagaricus meleagris
Q3L245: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

 33% id,
55% cov

More...

PGA1_c21660: choline dehydrogenase BetA
is similar to:		 PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

 39% id,
94% cov

PDH2_LEUMG / Q3L243: Pyranose dehydrogenase 2; PDH 2; Pyranose:quinone oxidoreductase 2; EC 1.1.99.29 from Leucoagaricus meleagris
Q3L243: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

 32% id,
92% cov

PDH1_AGABI / Q3L1D1: Pyranose dehydrogenase; PDH; Glucose dehydrogenase; GDH; Pyranose 2-dehydrogenase; Pyranose:quinone oxidoreductase; EC 1.1.99.29 from Agaricus bisporus
Q3L1D1: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus bisporus

 32% id,
92% cov

More...

PGA1_c30400: alcohol dehydrogenase AlkJ
is similar to:		 PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

 37% id,
95% cov

PDH1_AGABI / Q3L1D1: Pyranose dehydrogenase; PDH; Glucose dehydrogenase; GDH; Pyranose 2-dehydrogenase; Pyranose:quinone oxidoreductase; EC 1.1.99.29 from Agaricus bisporus
Q3L1D1: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus bisporus

 31% id,
93% cov

PDH2_LEUMG / Q3L243: Pyranose dehydrogenase 2; PDH 2; Pyranose:quinone oxidoreductase 2; EC 1.1.99.29 from Leucoagaricus meleagris
Q3L243: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

 31% id,
94% cov

More...

PGA1_262p00210: alcohol dehydrogenase AlkJ
is similar to:		 PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

 36% id,
95% cov

PDH3_LEUMG / Q0R4L2: Pyranose dehydrogenase 3; PDH 3; Pyranose:quinone oxidoreductase 3; EC 1.1.99.29 from Leucoagaricus meleagris
Q0R4L2: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

 29% id,
93% cov

PDH1_AGABI / Q3L1D1: Pyranose dehydrogenase; PDH; Glucose dehydrogenase; GDH; Pyranose 2-dehydrogenase; Pyranose:quinone oxidoreductase; EC 1.1.99.29 from Agaricus bisporus
Q3L1D1: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus bisporus

 29% id,
93% cov

More...

PGA1_c27200: alcohol dehydrogenase, iron containing
is similar to:		 PaperBLAST

T0Q1Z2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia diclina

 28% id,
93% cov

W4G0G7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces astaci

 28% id,
92% cov

A0A067BRK4: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia parasitica

 28% id,
93% cov

More...

PGA1_c23360: putative iron containing alcohol dehydrogenase
is similar to:		 PaperBLAST

T0Q1Z2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia diclina

 28% id,
88% cov

A0A067BRK4: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia parasitica

 28% id,
88% cov

B7FWP2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Phaeodactylum tricornutum

 27% id,
90% cov

More...

PGA1_78p00130: putative oxidoreductase, GFO/IDH/MOCA family
is similar to:		 PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

 28% id,
60% cov

PGA1_c07280: putative oxidoreduktase
is similar to:		 PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

 25% id,
64% cov

PGA1_c09100: putative thiamine biosynthesis oxidoreductase ThiO
is similar to:		 PaperBLAST

L2HDH_ACCRE / A0A011QK89: L-2-hydroxyglutarate dehydrogenase; EC 1.1.99.2 from Accumulibacter regalis

 28% id,
49% cov

PGA1_c27960: putative oxidoreductase
is similar to:		 PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

 30% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2427075-2428310 (frame +3) on PGA1_c
is similar to:		 PaperBLAST

B7FWP2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Phaeodactylum tricornutum
Also see hits to annotated proteins above

 27% id,
93% cov

L8HAM2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Acanthamoeba castellanii
Also see hits to annotated proteins above

 28% id,
75% cov

2914075-2915310 (frame +1) on PGA1_c
is similar to:		 PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Also see hits to annotated proteins above

 30% id,
48% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory