Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 17 curated entries in PaperBLAST's database that match '1.13.11.2' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c32210: 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD
is similar to:
PaperBLAST

Q4J6K0: catechol 2,3-dioxygenase (EC 1.13.11.2) from Sulfolobus acidocaldarius

31% id,
94% cov

V5W6K5: catechol 2,3-dioxygenase (EC 1.13.11.2) from Saccharolobus solfataricus

28% id,
86% cov

tbuE / Q59220: catechol 2,3-dioxygenase (EC 1.13.11.2) from Ralstonia pickettii

31% id,
38% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory