Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 1 curated entries in PaperBLAST's database that match '1.13.12.4' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c04920: l-lactate dehydrogenase IldD is similar to: | PaperBLAST |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 33% id, 89% cov |
| PGA1_c07690: (S)-mandelate dehydrogenase MdlB is similar to: | PaperBLAST |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 31% id, 91% cov |
| PGA1_c09430: l-lactate dehydrogenase IldD is similar to: | PaperBLAST |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 34% id, 42% cov |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 34% id, 36% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 483273-484478 (frame -1) on PGA1_c is similar to: | PaperBLAST |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 33% id, 93% cov |
Lawrence Berkeley National Laboratory