Curated BLAST
Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 21 curated entries in PaperBLAST's database that match '1.17.1.8' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query
PGA1_c32920: dihydrodipicolinate reductase DapB is similar to: | PaperBLAST |
Q2YJN7: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Brucella abortus | 58% id, 99% cov |
Q6G2G3: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Bartonella henselae | 48% id, 99% cov |
Q9K1F1: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Neisseria meningitidis | 46% id, 97% cov |
DvMF_0450: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Desulfovibrio vulgaris | 43% id, 99% cov |
DAPB_ECOLI / P04036: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Escherichia coli DapB / b0031: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Escherichia coli dapB / P04036: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Escherichia coli | 44% id, 96% cov |
Q5HG24: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Staphylococcus aureus | 40% id, 77% cov |
DAPB_THEMA / Q9X1K8: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Thermotoga maritima | 32% id, 96% cov |
dapB / P42976: dihydrodipicolinate reductase subunit (EC 1.17.1.8) from Bacillus subtilis | 32% id, 89% cov |
CA265_RS15670: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Pedobacter sp. | 30% id, 96% cov |
Echvi_2395: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Echinicola vietnamensis | 29% id, 99% cov |
dapB / P40110: dihydropicolinate reductase subunit (EC 1.17.1.8) from Corynebacterium glutamicum P40110: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Corynebacterium glutamicum | 29% id, 90% cov |
DAPB_MYCTU / P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Mycobacterium tuberculosis dapB / P9WP23: dihydropicolinate reductase subunit (EC 1.17.1.8) from Mycobacterium tuberculosis P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Mycobacterium tuberculosis | 33% id, 74% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory