Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 6 curated entries in PaperBLAST's database that match '1.5.1.1' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c31650: putative ornithine cyclodeaminase/mu-crystallin family protein is similar to: | PaperBLAST |
Q485R8: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1) from Colwellia psychrerythraea | 29% id, 84% cov |
CRYM / Q14894: ketimine reductase monomer (EC 1.5.1.1; EC 1.5.1.25) from Homo sapiens | 33% id, 71% cov |
| PGA1_c16390: ornithine cyclodeaminase ArcB is similar to: | PaperBLAST |
Q485R8: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1) from Colwellia psychrerythraea | 25% id, 96% cov |
| PGA1_262p01410: malate/L-lactate dehydrogenase-like protein is similar to: | PaperBLAST |
dpkA / Q88GX6: Δ1-piperideine-2-carboxylate reductase (EC 1.5.1.1) from Pseudomonas putida | 41% id, 43% cov |
Q4U331: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1); 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Pseudomonas syringae | 39% id, 41% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 152973-153656 (frame -3) on PGA1_262p is similar to: | PaperBLAST |
dpkA / Q88GX6: Δ1-piperideine-2-carboxylate reductase (EC 1.5.1.1) from Pseudomonas putida | 40% id, 55% cov |
Q4U331: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1); 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Pseudomonas syringae | 38% id, 53% cov |
| 153449-154048 (frame -1) on PGA1_262p is similar to: | PaperBLAST |
dpkA / Q88GX6: Δ1-piperideine-2-carboxylate reductase (EC 1.5.1.1) from Pseudomonas putida | 37% id, 44% cov |
Lawrence Berkeley National Laboratory