Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 35 curated entries in PaperBLAST's database that match '2.3.3.9' as complete word(s).
These curated entries have 22 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c09900: malate synthase GlcB is similar to: | PaperBLAST |
Psest_0354: Malate synthase G (EC 2.3.3.9) from Pseudomonas stutzeri | 60% id, 98% cov |
MASZ_MYCLB / B8ZSN3: Malate synthase G; EC 2.3.3.9 from Mycobacterium leprae | 58% id, 99% cov |
MASZ_MYCTO / P9WK16: Malate synthase G; EC 2.3.3.9 from Mycobacterium tuberculosis | 58% id, 97% cov |
| PGA1_c03680: putative citrate lyase subunit beta is similar to: | PaperBLAST |
CLYBL_HUMAN / Q8N0X4: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Homo sapiens | 30% id, 86% cov |
CLYBL_MOUSE / Q8R4N0: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein, mitochondrial; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Mus musculus | 30% id, 87% cov |
ACEB_HALVD / D4GTL2: Malate synthase; MSH; EC 2.3.3.9 from Haloferax volcanii | 27% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 355111-355977 (frame +1) on PGA1_c is similar to: | PaperBLAST |
CLYBL_MOUSE / Q8R4N0: Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein, mitochondrial; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Mus musculus | 30% id, 89% cov |
Lawrence Berkeley National Laboratory