Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 18 curated entries in PaperBLAST's database that match '2.4.2.2' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c11940: thymidine phosphorylase DeoA
is similar to:
PaperBLAST

Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
deoA / P07650: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli

49% id,
99% cov

Q5SHF9: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus

41% id,
100% cov

PDP_GEOSE / P77836: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Geobacillus stearothermophilus
pyn / GB|BAA13512.1: pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Geobacillus stearothermophilus
pdp / P77836: pyrimidine-nucleoside phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Geobacillus stearothermophilus

39% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory