Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 10 curated entries in PaperBLAST's database that match '2.4.2.4' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c11940: thymidine phosphorylase DeoA
is similar to:
PaperBLAST

Q7CP66: thymidine phosphorylase (EC 2.4.2.4) from Salmonella enterica

49% id,
99% cov

Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
deoA / GB|AAC77335.1: thymidine phosphorylase; EC 2.4.2.4 from Escherichia coli
P07650: thymidine phosphorylase (EC 2.4.2.4) from Escherichia coli

49% id,
99% cov

TYPH_HUMAN / P19971: Thymidine phosphorylase; TP; Gliostatin; Platelet-derived endothelial cell growth factor; PD-ECGF; TdRPase; EC 2.4.2.4 from Homo sapiens
P19971: thymidine phosphorylase (EC 2.4.2.4) from Homo sapiens

42% id,
90% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory