Curated BLAST for Genomes


Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 3 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c13950: cysteine synthase CysK
is similar to:

CYSM_MYCTU / P9WP53: O-phosphoserine sulfhydrylase; OPS sulfhydrylase; CysO-thiocarboxylate-dependent cysteine synthase; Cysteine synthase B; CSase B; O-phosphoserine-specific cysteine synthase; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase; EC from Mycobacterium tuberculosis
cysM / P9WP53: CysO-thiocarboxylate-dependent cysteine synthase monomer (EC from Mycobacterium tuberculosis
P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC; O-phosphoserine sulfhydrylase (EC from Mycobacterium tuberculosis

32% id,
92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory