Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 8 curated entries in PaperBLAST's database that match '2.5.1.65' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c13950: cysteine synthase CysK
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

36% id,
100% cov

P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

32% id,
92% cov

CYSK2_MYCTU / Q79FV4: S-sulfocysteine synthase; O-phospho-L-serine-dependent S-sulfocysteine synthase; OPS-dependent S-sulfocysteine synthase; O-phosphoserine sulfhydrylase; EC 2.8.5.1; EC 2.5.1.65 from Mycobacterium tuberculosis
Q79FV4: cysteine synthase (EC 2.5.1.47); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

30% id,
82% cov

PGA1_c36290: putative phenylserine dehydratase
is similar to:
PaperBLAST

CYSO_AERPE / Q9YBL2: Protein CysO; Cystathionine beta-synthase; Cysteine synthase; O-acetylserine sulfhydrylase; O-phosphoserine sulfhydrylase; Serine sulfhydrase; EC 4.2.1.22; EC 2.5.1.47; EC 2.5.1.65 from Aeropyrum pernix
cysO / Q9YBL2: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.65) from Aeropyrum pernix
Q9YBL2: cysteine synthase (EC 2.5.1.47); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Aeropyrum pernix

26% id,
70% cov

PGA1_262p00750: Threonine dehydratase
is similar to:
PaperBLAST

cysK / Q5JIZ7: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.65) from Thermococcus kodakarensis

28% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory