Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 17 curated entries in PaperBLAST's database that match '2.6.1.39' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c21250: aspartate aminotransferase AatA
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

54% id,
96% cov

PGA1_c24230: acetylornithine aminotransferase ArgD
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

35% id,
95% cov

PGA1_c28750: aminotransferase class-III
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

32% id,
96% cov

PGA1_c09350: aminotransferase class-III
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

28% id,
96% cov

PGA1_c34400: aminotransferase class-III
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

28% id,
97% cov

PGA1_c34750: putative aminotransferase class 3
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

28% id,
98% cov

PGA1_c14500: transcriptional regulator, GntR family
is similar to:
PaperBLAST

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

29% id,
93% cov

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

29% id,
93% cov

AADAT_HUMAN / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Homo sapiens
AADAT / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (EC 2.6.1.7; EC 2.6.1.39) from Homo sapiens
Q8N5Z0: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Homo sapiens

26% id,
88% cov

More...

PGA1_c09150: adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

31% id,
85% cov

PGA1_262p02330: putative aspartate aminotransferase
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

27% id,
96% cov

PGA1_262p01530: transcriptional regulator, GntR family
is similar to:
PaperBLAST

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

28% id,
91% cov

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

28% id,
91% cov

AADAT_MOUSE / Q9WVM8: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Mus musculus
Q9WVM8: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Mus musculus

24% id,
93% cov

More...

PGA1_c07810: aminotransferase class-III
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

29% id,
88% cov

PGA1_c20300: aminotransferase
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

25% id,
95% cov

PGA1_c16840: putative aspartate aminotransferase
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

24% id,
97% cov

PGA1_c28810: transcriptional regulator, GntR family
is similar to:
PaperBLAST

AADAT_HUMAN / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Homo sapiens
AADAT / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (EC 2.6.1.7; EC 2.6.1.39) from Homo sapiens
Q8N5Z0: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Homo sapiens

26% id,
76% cov

ARO8_YEAST / P53090: Aromatic/aminoadipate aminotransferase 1; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Aromatic amino acid aminotransferase 1; Aromatic amino acid aminotransferase I; Aromatic amino acid-requiring protein 8; EC 2.6.1.39; EC 2.6.1.57 from Saccharomyces cerevisiae
ARO8 / P53090: aromatic amino acid/aminoadipate aminotransferase monomer (EC 2.6.1.39; EC 2.6.1.1; EC 2.6.1.28) from Saccharomyces cerevisiae
P53090: 2-aminoadipate transaminase (EC 2.6.1.39); aromatic-amino-acid transaminase (EC 2.6.1.57) from Saccharomyces cerevisiae

23% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory