Curated BLAST for Genomes


Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 27 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c36150: phosphoserine aminotransferase SerC
is similar to:

SERC_METBF / P52878: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC from Methanosarcina barkeri
P52878: phosphoserine transaminase (EC from Methanosarcina barkeri

61% id,
99% cov

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC; EC from Methanosarcina acetivorans

61% id,
99% cov

PGA1_c23940: putative serine-glyoxylate aminotransferase
is similar to:

P74281: phosphoserine transaminase (EC from Synechocystis sp.

33% id,
98% cov

serC / Q58369: phosphoserine aminotransferase monomer (EC; EC from Methanocaldococcus jannaschii

27% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory