Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 4 curated entries in PaperBLAST's database that match '2.6.1.82' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c34400: aminotransferase class-III
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

61% id,
100% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

28% id,
84% cov

PGA1_c07810: aminotransferase class-III
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

40% id,
98% cov

PGA1_c09350: aminotransferase class-III
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

38% id,
92% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

30% id,
83% cov

PGA1_c32300: aminotransferase class-III
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

35% id,
94% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

31% id,
82% cov

PGA1_c28770: taurine--pyruvate aminotransferase Tpa
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

34% id,
96% cov

PGA1_c28750: aminotransferase class-III
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

33% id,
91% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

34% id,
80% cov

PGA1_c24230: acetylornithine aminotransferase ArgD
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

35% id,
83% cov

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

29% id,
90% cov

PGA1_c34750: putative aminotransferase class 3
is similar to:
PaperBLAST

A0A4P8GNL5: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Pseudomonas putida

28% id,
98% cov

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

29% id,
84% cov

PGA1_c09150: adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA
is similar to:
PaperBLAST

PAT_ECOLI / P42588: Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Diamine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC 2.6.1.82; EC 2.6.1.29 from Escherichia coli
patA / P42588: putrescine aminotransferase (EC 2.6.1.82; EC 2.6.1.29) from Escherichia coli
P42588: putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) from Escherichia coli

34% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory