Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.9'.

These curated entries have 51 distinct sequences.

Running ublast with E ≤ 0.01

Found 19 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c25240: histidinol-phosphate aminotransferase HisC
is similar to:
PaperBLAST

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

100% id,
100% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

52% id,
97% cov

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

46% id,
94% cov

More...

PGA1_c05070: putative pyridoxal-phosphate-dependent aminotransferase
is similar to:
PaperBLAST

FDTB_ANETH / Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; dTDP-6-deoxy-D-xylo-hex-3-ulose aminase; EC 2.6.1.90 from Aneurinibacillus thermoaerophilus
fdtB / Q6T1W6: dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus
Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus

52% id,
99% cov

WBPE_PSEAE / Q9HZ76: UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; UDP-3-oxo-D-GlcNAcA aminotransferase; UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronic acid transaminase; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; EC 2.6.1.98 from Pseudomonas aeruginosa
wbpE / Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa
Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa

39% id,
99% cov

B2RK60: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Porphyromonas gingivalis

39% id,
96% cov

More...

PGA1_c09350: aminotransferase class-III
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

42% id,
94% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

43% id,
92% cov

GATP1_ORYSJ / Q7XN11: Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa

45% id,
84% cov

More...

PGA1_c34400: aminotransferase class-III
is similar to:
PaperBLAST

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

40% id,
97% cov

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

40% id,
97% cov

Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

41% id,
90% cov

More...

PGA1_c07810: aminotransferase class-III
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

38% id,
91% cov

Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

38% id,
90% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

38% id,
88% cov

More...

PGA1_c23930: putative histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

31% id,
98% cov

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

32% id,
92% cov

HP15_2427: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Marinobacter adhaerens

29% id,
98% cov

More...

PGA1_c28750: aminotransferase class-III
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

35% id,
88% cov

GATP3_SOLLC / Q84P52: Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum
Q84P52: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

36% id,
79% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

33% id,
86% cov

More...

PGA1_c32300: aminotransferase class-III
is similar to:
PaperBLAST

Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

33% id,
90% cov

GATP1_ORYSJ / Q7XN11: Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa

33% id,
86% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

31% id,
93% cov

More...

PGA1_c28770: taurine--pyruvate aminotransferase Tpa
is similar to:
PaperBLAST

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

29% id,
95% cov

Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

31% id,
86% cov

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

29% id,
91% cov

More...

PGA1_c11500: putative pyridoxal-phosphate-dependent aminotransferase
is similar to:
PaperBLAST

YfbE / b2253: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92; EC 2.6.1.87) from Escherichia coli
arnB / P77690: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92) from Escherichia coli

28% id,
97% cov

PSEC_CAMJJ / Q5QKR7: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Campylobacter jejuni

26% id,
68% cov

PSEC_CAMJE / Q0P8W3: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Campylobacter jejuni

24% id,
63% cov

PGA1_c02310: putative pyridoxal-phosphate-dependent aminotransferase
is similar to:
PaperBLAST

PSEC_HELPY / O25130: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Helicobacter pylori
pseC / O25130: PseC monomer (EC 2.6.1.92) from Helicobacter pylori
O25130: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase (EC 2.6.1.92) from Helicobacter pylori

26% id,
97% cov

PSEC_CAMJJ / Q5QKR7: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Campylobacter jejuni

24% id,
98% cov

PSEC_CAMJE / Q0P8W3: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Campylobacter jejuni

24% id,
98% cov

PGA1_c24230: acetylornithine aminotransferase ArgD
is similar to:
PaperBLAST

KACL_STRKN / Q6L741: 2'-deamino-2'-hydroxyneamine transaminase; Kanamycin biosynthesis protein B; Neamine transaminase KanB; EC 2.6.1.94; EC 2.6.1.93 from Streptomyces kanamyceticus
kacL / Q6L741: glutamate--6'-dehydroparomanine aminotransferase (EC 2.6.1.94; EC 2.6.1.93) from Streptomyces kanamyceticus

27% id,
90% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

26% id,
88% cov

GATP3_SOLLC / Q84P52: Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum
Q84P52: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

28% id,
82% cov

More...

PGA1_c09150: adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA
is similar to:
PaperBLAST

GATP_ARATH / Q94CE5: Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana
POP2 / Q94CE5: γ-aminobutyrate transaminase (pyruvate dependent) (EC 2.6.1.96) from Arabidopsis thaliana
Q94CE5: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Arabidopsis thaliana

28% id,
82% cov

GATP1_SOLLC / Q84P54: Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP1 / Q84P54: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P54: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

29% id,
79% cov

GATP1_ORYSJ / Q7XN11: Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa

28% id,
80% cov

More...

PGA1_c00830: putative threonine-phosphate decarboxylase CobC
is similar to:
PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

25% id,
90% cov

orf2651 / A0A0D3RBW0: tryptophan—pyruvate aminotransferase (EC 2.6.1.99) from Streptomyces griseus

24% id,
91% cov

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

28% id,
69% cov

More...

PGA1_c10260: putative pyridoxal-phosphate-dependent aminotransferase
is similar to:
PaperBLAST

WBPE_PSEAE / Q9HZ76: UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; UDP-3-oxo-D-GlcNAcA aminotransferase; UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronic acid transaminase; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; EC 2.6.1.98 from Pseudomonas aeruginosa
wbpE / Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa
Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa

29% id,
74% cov

FDTB_ANETH / Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; dTDP-6-deoxy-D-xylo-hex-3-ulose aminase; EC 2.6.1.90 from Aneurinibacillus thermoaerophilus
fdtB / Q6T1W6: dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus
Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus

30% id,
65% cov

PSEC_HELPY / O25130: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Helicobacter pylori
pseC / O25130: PseC monomer (EC 2.6.1.92) from Helicobacter pylori
O25130: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase (EC 2.6.1.92) from Helicobacter pylori

22% id,
71% cov

More...

PGA1_c25510: putative pyridoxal-phosphate-dependent aminotransferase
is similar to:
PaperBLAST

FDTB_ANETH / Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; dTDP-6-deoxy-D-xylo-hex-3-ulose aminase; EC 2.6.1.90 from Aneurinibacillus thermoaerophilus
fdtB / Q6T1W6: dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus
Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus

33% id,
66% cov

BC_5273 / Q814Z4: UDP-4(S)-amino-sugar transaminase monomer (EC 2.6.1.92) from Bacillus cereus

24% id,
74% cov

PGA1_262p02330: putative aspartate aminotransferase
is similar to:
PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

25% id,
85% cov

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

23% id,
83% cov

PGA1_c05600: queuosine biosynthesis protein QueC
is similar to:
PaperBLAST

Q981C9: archaeosine synthase (EC 2.6.1.97) from Saccharolobus solfataricus

31% id,
48% cov

PGA1_c21250: aspartate aminotransferase AatA
is similar to:
PaperBLAST

YfbE / b2253: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92; EC 2.6.1.87) from Escherichia coli
arnB / P77690: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92) from Escherichia coli

32% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3016206-3017669 (frame +3) on PGA1_c
is similar to:
PaperBLAST

Q7XN12: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa
Also see hits to annotated proteins above

30% id,
95% cov

574129-574890 (frame +1) on PGA1_c
is similar to:
PaperBLAST

Q981C9: archaeosine synthase (EC 2.6.1.97) from Saccharolobus solfataricus
Also see hits to annotated proteins above

30% id,
49% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory