Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 114 curated entries in PaperBLAST's database that match '2.7.1.1' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_262p00420: Transcriptional regulator/sugar kinase
is similar to:
PaperBLAST

Q5SLJ4: hexokinase (EC 2.7.1.1) from Thermus thermophilus

31% id,
98% cov

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

31% id,
98% cov

glk / Q8DVE8: glucokinase subunit (EC 2.7.1.1) from Streptococcus mutans

28% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2927579-2928829 (frame +2) on PGA1_c
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

28% id,
50% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory