Curated BLAST for Genomes


Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 25 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c14010: xylulose kinase XylB
is similar to:

PGA1_c14010: Xylulose kinase (EC from Phaeobacter inhibens

100% id,
100% cov

SMc03164: Xylulose kinase (EC from Sinorhizobium meliloti

58% id,
98% cov

Dshi_1997: Xylulose kinase (EC from Dinoroseobacter shibae

56% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory