Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens DSM 17395 (Phaeo)

Found 6 curated entries in PaperBLAST's database that match '2.7.1.229' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Phaeobacter inhibens DSM 17395, or try another query

PGA1_c07240: putative 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

DEOK_SALTI / P0DX97: Deoxyribokinase; dRK; ATP:2-deoxy-D-ribose 5-phosphotransferase; EC 2.7.1.229 from Salmonella typhi
DEOK_SALTY / Q7CPF5: Deoxyribokinase; dRK; ATP:2-deoxy-D-ribose 5-phosphotransferase; EC 2.7.1.229 from Salmonella typhimurium
deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi

22% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory