Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 46 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c28020: fructokinase Frk
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

51% id,
99% cov

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

43% id,
86% cov

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

38% id,
99% cov

More...

PGA1_c07240: putative 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

29% id,
95% cov

Q42896: fructokinase (EC 2.7.1.4) from Solanum lycopersicum

28% id,
98% cov

Q42645: fructokinase (EC 2.7.1.4) from Beta vulgaris

28% id,
94% cov

More...

PGA1_c34980: putative pfkB family carbohydrate kinase
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

27% id,
98% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

28% id,
95% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

33% id,
44% cov

PGA1_c29050: putative carbohydrate kinase, PfkB family
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

27% id,
91% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

26% id,
91% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

27% id,
85% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory