Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 78 curated entries in PaperBLAST's database that match '2.7.2.1'.

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c15510: glutamate 5-kinase ProB
is similar to:
PaperBLAST

Ga0059261_3512: glutamate 5-kinase (EC 2.7.2.11) from Sphingomonas koreensis

50% id,
97% cov

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

41% id,
99% cov

P9WHU9: glutamate 5-kinase (EC 2.7.2.11) from Mycobacterium tuberculosis

38% id,
95% cov

More...

PGA1_c28840: acetate kinase AckA
is similar to:
PaperBLAST

Q3IYF1: fatty acid kinase (EC 2.7.2.18) from Cereibacter sphaeroides

43% id,
94% cov

ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis

40% id,
99% cov

ACKA_CORGL / P77845: Acetate kinase; Acetokinase; EC 2.7.2.1 from Corynebacterium glutamicum

40% id,
98% cov

More...

PGA1_c02050: acetylglutamate kinase ArgB
is similar to:
PaperBLAST

LYSZ_SULAC / Q4JAQ2: [LysW]-aminoadipate/[LysW]-glutamate kinase; EC 2.7.2.17; EC 2.7.2.19 from Sulfolobus acidocaldarius
lysZ / Q4JAQ2: [LysW}-glutamate/[LysW]-aminoadipate kinase (EC 2.7.2.17; EC 2.7.2.19) from Sulfolobus acidocaldarius
Q4JAQ2: [amino group carrier protein]-L-2-aminoadipate 6-kinase (EC 2.7.2.17) from Sulfolobus acidocaldarius

28% id,
100% cov

CA265_RS20855: glutamate 5-kinase (EC 2.7.2.11) from Pedobacter sp.

23% id,
67% cov

PGA1_c24870: phosphoribosylaminoimidazole carboxylase ATPase subunit PurK
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

28% id,
93% cov

PGA1_c15520: gamma-glutamyl phosphate reductase ProA
is similar to:
PaperBLAST

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

34% id,
58% cov

P5CS_MOUSE / Q9Z110: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Mus musculus

36% id,
54% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

34% id,
56% cov

More...

PGA1_c12600: biotin carboxylase AccA
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

26% id,
46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1613086-1614321 (frame +1) on PGA1_c
is similar to:
PaperBLAST

Ga0059261_3512: glutamate 5-kinase (EC 2.7.2.11) from Sphingomonas koreensis
Also see hits to annotated proteins above

49% id,
99% cov

P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC 2.7.2.11; EC 1.2.1.41 from Homo sapiens
ALDH18A1 / P54886: δ-1-pyrroline-5-carboxylate synthase (EC 1.2.1.41; EC 2.7.2.11) from Homo sapiens
Also see hits to annotated proteins above

31% id,
34% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory