Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 5 curated entries in PaperBLAST's database that match '3.1.1.24' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c04570: putative 3-oxoadipate enol-lactonase
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

40% id,
99% cov

pcaD / Q88N36: subunit of 3-oxoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas putida
Q88N36: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Pseudomonas putida

38% id,
99% cov

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

37% id,
100% cov

More...

PGA1_c02570: putative 4-carboxymuconolactone decarboxylase PcaC
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

38% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory