Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 331 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 255 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c07330: beta-galactosidase 1
is similar to:
PaperBLAST

BGAL_THETH / O69315: Beta-galactosidase; Beta-gal; Lactase; EC 3.2.1.23 from Thermus thermophilus
BAA28362.1: β-galactosidase (A4-β-Gal) (EC 3.2.1.23)

53% id,
96% cov

ABI35985.1: β-galactosidase (EC 3.2.1.23)

53% id,
96% cov

BGAL1_THESP / Q8GEA9: Beta-galactosidase BgaA; Beta-gal; EC 3.2.1.23 from Thermus sp.
AAN05443.1: β-galactosidase (BgaA) (EC 3.2.1.23)

52% id,
96% cov

More...

PGA1_c07840: beta-glucosidase A
is similar to:
PaperBLAST

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

45% id,
96% cov

A0A1E1FFN6: beta-glucosidase (EC 3.2.1.21); beta-galactosidase (EC 3.2.1.23); beta-D-fucosidase (EC 3.2.1.38) from uncultured microorganism

44% id,
95% cov

ACL74759.1: cellodextrin glucohydrolase (Ccel_0374) (EC 3.2.1.21|3.2.1.23|3.2.1.74)

40% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory