Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 39 curated entries in PaperBLAST's database that match '3.2.1.80'.

These curated entries have 31 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Phaeobacter inhibens BS107, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1911270-1911659 (frame +3) on PGA1_c
is similar to:
PaperBLAST

ACC61059.1: exo-inulinase (EC 3.2.1.80)

30% id,
22% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory