Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 7 curated entries in PaperBLAST's database that match '3.5.1.16' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c07830: acetylornithine deacetylase ArgE is similar to: | PaperBLAST |
ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli | 36% id, 92% cov |
argE / Q8P8J5: acetylcitrulline deacetylase subunit (EC 3.5.1.16) from Xanthomonas campestris | 30% id, 98% cov |
| PGA1_c10140: acetylornithine deacetylase ArgE is similar to: | PaperBLAST |
ARGE_ECOLI / P23908: Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 from Escherichia coli | 31% id, 98% cov |
argE / Q8P8J5: acetylcitrulline deacetylase subunit (EC 3.5.1.16) from Xanthomonas campestris | 37% id, 15% cov |
ARGE_DICDI / P54638: Acetylornithine deacetylase; N-acetylornithinase; AO; Acetylornithinase; NAO; EC 3.5.1.16 from Dictyostelium discoideum | 42% id, 10% cov |
| PGA1_c36420: succinyl-diaminopimelate desuccinylase DapE is similar to: | PaperBLAST |
ARGE_DICDI / P54638: Acetylornithine deacetylase; N-acetylornithinase; AO; Acetylornithinase; NAO; EC 3.5.1.16 from Dictyostelium discoideum | 26% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3810328-3811518 (frame +1) on PGA1_c is similar to: | PaperBLAST |
ARGE_DICDI / P54638: Acetylornithine deacetylase; N-acetylornithinase; AO; Acetylornithinase; NAO; EC 3.5.1.16 from Dictyostelium discoideum | 25% id, 84% cov |
Lawrence Berkeley National Laboratory