Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 36 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c27880: N-acetylglucosamine-6-phosphate deacetylase NagA
is similar to:
PaperBLAST

CCNA_00452: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Caulobacter crescentus

43% id,
98% cov

Shewana3_3112: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.

45% id,
87% cov

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

45% id,
87% cov

More...

PGA1_c34240: adenine deaminase Ade
is similar to:
PaperBLAST

agaA / Q8XAC3: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli

26% id,
28% cov

PGA1_c24880: Metal-dependent hydrolase involved in phosphonate metabolism
is similar to:
PaperBLAST

SO3505: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella oneidensis

45% id,
15% cov

Shewana3_3112: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.

45% id,
15% cov

BPHYT_RS02730: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Burkholderia phytofirmans

39% id,
15% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory