Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 6 curated entries in PaperBLAST's database that match '3.5.1.53' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c34700: putative carbon-nitrogen hydrolase
is similar to:
PaperBLAST

NILP1_ARATH / Q8VYF5: N-carbamoylputrescine amidase; Nitrilase-like protein 1; EC 3.5.1.53 from Arabidopsis thaliana
At2g27450 / Q8VYF5: At2g27450-monomer (EC 3.5.1.53) from Arabidopsis thaliana

25% id,
91% cov

aguB / Q9I6J8: N-carbamoylputrascine amidohydrolase subunit (EC 3.5.1.53) from Pseudomonas aeruginosa

25% id,
90% cov

AGUB_SOLLC / Q9XGI9: N-carbamoylputrescine amidase; EC 3.5.1.53 from Solanum lycopersicum

24% id,
93% cov

PGA1_c31140: putative carbon-nitrogen hydrolase
is similar to:
PaperBLAST

aguB / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

42% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory