Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c36350: imidazolonepropionase HutI
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

100% id,
100% cov

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens

61% id,
95% cov

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

56% id,
97% cov

More...

PGA1_262p01750: putative amidohydrolase
is similar to:
PaperBLAST

PfGW456L13_317: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

27% id,
44% cov

Pf1N1B4_1579: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

26% id,
46% cov

PGA1_c21850: putative hydroxydechloroatrazine ethylaminohydrolase
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

36% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory