Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 163 curated entries in PaperBLAST's database that match '3.5.3.1'.

These curated entries have 116 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c36360: putative formiminoglutamate deiminase
is similar to:
PaperBLAST

PGA1_c36360: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Phaeobacter inhibens

100% id,
100% cov

HUTF_PSEAE / Q9HU77: Formimidoylglutamate deiminase; Formiminoglutamate deiminase; N-formimino-L-glutamate deiminase; N-formimino-L-glutamate iminohydrolase; EC 3.5.3.13 from Pseudomonas aeruginosa
Q9HU77: formimidoylglutamate deiminase (EC 3.5.3.13); formimidoylglutamase (EC 3.5.3.8) from Pseudomonas aeruginosa

48% id,
100% cov

SMc00673: Formiminoglutamic iminohydrolase (EC 3.5.3.13) from Sinorhizobium meliloti

49% id,
98% cov

More...

PGA1_c16370: arginase ArcA
is similar to:
PaperBLAST

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum

58% id,
94% cov

N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica

42% id,
98% cov

A4IJM8: arginase (EC 3.5.3.1) from Geobacillus thermodenitrificans

38% id,
99% cov

More...

PGA1_c00310: guanidinobutyrase
is similar to:
PaperBLAST

GPUA_PSEAE / Q9I6K2: Guanidinopropionase; EC 3.5.3.17 from Pseudomonas aeruginosa
Q9I6K2: Guanidinopropionase (EC 3.5.3.17) from Pseudomonas aeruginosa

53% id,
99% cov

A0A146AXJ2: agmatinase (EC 3.5.3.11) from Apostichopus japonicus

47% id,
88% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens
AGMAT / Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens
Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens

45% id,
86% cov

More...

PGA1_c19920: agmatinase SpeB
is similar to:
PaperBLAST

A0A146AXJ2: agmatinase (EC 3.5.3.11) from Apostichopus japonicus

55% id,
88% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens
AGMAT / Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens
Q9BSE5: agmatinase (EC 3.5.3.11) from Homo sapiens

54% id,
88% cov

W5PHZ9: agmatinase (EC 3.5.3.11) from Ovis aries

55% id,
86% cov

More...

PGA1_c19930: agmatinase SpeB
is similar to:
PaperBLAST

SPEB_PROMI / Q7X3P1: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Proteus mirabilis

45% id,
94% cov

SPEB_ECOLI / P60651: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Escherichia coli
SpeB / b2937: agmatinase (EC 3.5.3.11) from Escherichia coli
speB / RF|NP_417412: agmatinase; EC 3.5.3.11 from Escherichia coli
speB / P60651: agmatinase (EC 3.5.3.11) from Escherichia coli

44% id,
93% cov

GPUA_PSEAE / Q9I6K2: Guanidinopropionase; EC 3.5.3.17 from Pseudomonas aeruginosa
Q9I6K2: Guanidinopropionase (EC 3.5.3.17) from Pseudomonas aeruginosa

38% id,
93% cov

More...

PGA1_262p02310: amidinotransferase
is similar to:
PaperBLAST

DDAH_PSEAE / Q9I4E3: N(G),N(G)-dimethylarginine dimethylaminohydrolase; DDAH; Dimethylarginine dimethylaminohydrolase; Dimethylargininase; EC 3.5.3.18 from Pseudomonas aeruginosa

39% id,
100% cov

DDAH_STRCO / Q9X7M4: N(G),N(G)-dimethylarginine dimethylaminohydrolase; DDAH; Dimethylarginine dimethylaminohydrolase; Dimethylargininase; EC 3.5.3.18 from Streptomyces coelicolor

35% id,
97% cov

DDAH1_RAT / O08557: N(G),N(G)-dimethylarginine dimethylaminohydrolase 1; DDAH-1; Dimethylarginine dimethylaminohydrolase 1; DDAHI; Dimethylargininase-1; EC 3.5.3.18 from Rattus norvegicus
O08557: dimethylargininase (EC 3.5.3.18) from Rattus norvegicus

32% id,
93% cov

More...

PGA1_c26490: putative agmatine deiminase
is similar to:
PaperBLAST

A0A0H2Z743: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

39% id,
99% cov

A0A0H2Z8C6: agmatine deiminase (EC 3.5.3.12) from Pseudomonas aeruginosa

38% id,
97% cov

A0A0H3G8U9: agmatine deiminase (EC 3.5.3.12) from Listeria monocytogenes

33% id,
97% cov

More...

PGA1_c00300: guanidinobutyrase
is similar to:
PaperBLAST

GPUA_PSEAE / Q9I6K2: Guanidinopropionase; EC 3.5.3.17 from Pseudomonas aeruginosa
Q9I6K2: Guanidinopropionase (EC 3.5.3.17) from Pseudomonas aeruginosa

35% id,
93% cov

SPEB_ECOLI / P60651: Agmatinase; Agmatine ureohydrolase; AUH; EC 3.5.3.11 from Escherichia coli
SpeB / b2937: agmatinase (EC 3.5.3.11) from Escherichia coli
speB / RF|NP_417412: agmatinase; EC 3.5.3.11 from Escherichia coli
speB / P60651: agmatinase (EC 3.5.3.11) from Escherichia coli

32% id,
95% cov

W5PHZ9: agmatinase (EC 3.5.3.11) from Ovis aries

35% id,
81% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory