Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 12 curated entries in PaperBLAST's database that match '3.5.3.7'.

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c19920: agmatinase SpeB
is similar to:
PaperBLAST

GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC 3.5.3.7 from Pseudomonas aeruginosa
gbuA / Q9I3S3: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas aeruginosa
Q9I3S3: guanidinobutyrase (EC 3.5.3.7) from Pseudomonas aeruginosa

62% id,
99% cov

gbuA / Q88EE2: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas putida

63% id,
98% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

54% id,
88% cov

More...

PGA1_c00310: guanidinobutyrase
is similar to:
PaperBLAST

GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC 3.5.3.7 from Pseudomonas aeruginosa
gbuA / Q9I3S3: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas aeruginosa
Q9I3S3: guanidinobutyrase (EC 3.5.3.7) from Pseudomonas aeruginosa

47% id,
100% cov

gbuA / Q88EE2: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas putida

47% id,
97% cov

gbuA / A0A0A1DPD5: 5-guanidino-2-oxopentanoate ureohydrolase (EC 3.5.3.7) from Nocardioides simplex

42% id,
98% cov

More...

PGA1_c19930: agmatinase SpeB
is similar to:
PaperBLAST

gbuA / A0A0A1DPD5: 5-guanidino-2-oxopentanoate ureohydrolase (EC 3.5.3.7) from Nocardioides simplex

40% id,
94% cov

gbuA / Q88EE2: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas putida

40% id,
92% cov

GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC 3.5.3.7 from Pseudomonas aeruginosa
gbuA / Q9I3S3: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas aeruginosa
Q9I3S3: guanidinobutyrase (EC 3.5.3.7) from Pseudomonas aeruginosa

39% id,
93% cov

More...

PGA1_c00300: guanidinobutyrase
is similar to:
PaperBLAST

gbuA / Q88EE2: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas putida

31% id,
91% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

33% id,
84% cov

GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC 3.5.3.7 from Pseudomonas aeruginosa
gbuA / Q9I3S3: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas aeruginosa
Q9I3S3: guanidinobutyrase (EC 3.5.3.7) from Pseudomonas aeruginosa

29% id,
92% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory