Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 17 curated entries in PaperBLAST's database that match '3.7.1.3' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c09980: kynureninase KynU
is similar to:
PaperBLAST

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

50% id,
95% cov

AO353_05935: Kynureninase (EC 3.7.1.3) from Pseudomonas fluorescens

49% id,
95% cov

PS417_23650: Kynureninase (EC 3.7.1.3) from Pseudomonas simiae

49% id,
95% cov

More...

PGA1_c23540: O-succinylhomoserine sulfhydrylase MetZ
is similar to:
PaperBLAST

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

28% id,
51% cov

PGA1_c15430: cysteine desulfurase SufS
is similar to:
PaperBLAST

BPHYT_RS16030: Kynureninase (EC 3.7.1.3) from Burkholderia phytofirmans

22% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory