Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c03470: diaminopimelate decarboxylase LysA is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 34% id, 99% cov |
| PGA1_c19080: TIGR00730 family protein is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 41% id, 71% cov |
| PGA1_c03800: putative lysine/ornithine decarboxylase is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 33% id, 87% cov |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 31% id, 89% cov |
| PGA1_c11650: putative lysine/ornithine decarboxylase is similar to: | PaperBLAST |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 33% id, 77% cov |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 33% id, 71% cov |
| PGA1_c31390: putative aromatic-L-amino-acid decarboxylase is similar to: | PaperBLAST |
desA / Q9L072: L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor | 29% id, 86% cov |
bibA / B6EP92: L-lysine decarboxylase (EC 4.1.1.18) from Aliivibrio salmonicida | 25% id, 82% cov |
| PGA1_c21340: putative L-2,4-diaminobutyrate decarboxylase is similar to: | PaperBLAST |
desA / Q9L072: L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor | 27% id, 89% cov |
bibA / B6EP92: L-lysine decarboxylase (EC 4.1.1.18) from Aliivibrio salmonicida | 25% id, 74% cov |
| PGA1_c13710: diaminopimelate decarboxylase-like protein is similar to: | PaperBLAST |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 23% id, 88% cov |
| PGA1_c36280: TIGR00730 family protein is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 23% id, 68% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 364643-365986 (frame +2) on PGA1_c is similar to: | PaperBLAST |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 31% id, 97% cov |
Lawrence Berkeley National Laboratory