Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 26 curated entries in PaperBLAST's database that match '4.1.1.20' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c03470: diaminopimelate decarboxylase LysA is similar to: | PaperBLAST |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 52% id, 100% cov |
Q9KVL7: diaminopimelate decarboxylase (EC 4.1.1.20) from Vibrio cholerae | 51% id, 100% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 43% id, 96% cov |
| PGA1_c13710: diaminopimelate decarboxylase-like protein is similar to: | PaperBLAST |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 30% id, 95% cov |
Q9KVL7: diaminopimelate decarboxylase (EC 4.1.1.20) from Vibrio cholerae | 30% id, 94% cov |
DCDA_THEMA / Q9X1K5: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Thermotoga maritima | 28% id, 97% cov |
| PGA1_c03800: putative lysine/ornithine decarboxylase is similar to: | PaperBLAST |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 29% id, 84% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 30% id, 83% cov |
P56129: diaminopimelate decarboxylase (EC 4.1.1.20) from Helicobacter pylori | 30% id, 83% cov |
| PGA1_c11650: putative lysine/ornithine decarboxylase is similar to: | PaperBLAST |
BT1374: diaminopimelate decarboxylase (EC 4.1.1.20) from Bacteroides thetaiotaomicron | 25% id, 94% cov |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 26% id, 85% cov |
| PGA1_c23510: aspartokinase LysC is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 25% id, 43% cov |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 49% id, 5% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory