Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 11 curated entries in PaperBLAST's database that match '4.1.1.48' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Phaeobacter inhibens BS107, or try another query
| PGA1_c16910: indole-3-glycerol phosphate synthase TrpC is similar to: | PaperBLAST |
P84126: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus | 40% id, 96% cov |
A1KJ27: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis | 36% id, 97% cov |
trpC / Q56319: indole-3-glycerol phosphate synthase (EC 4.1.1.48) from Thermotoga maritima | 35% id, 93% cov |
| PGA1_c16880: anthranilate synthase component II is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 45% id, 39% cov |
| PGA1_c06670: carbamoyl-phosphate synthase small chain is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 29% id, 36% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1762986-1763633 (frame +3) on PGA1_c is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 44% id, 40% cov |
Lawrence Berkeley National Laboratory