Curated BLAST for Genomes

 

Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 105 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 81 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c23910: fructose-bisphosphate aldolase class 1
is similar to:
PaperBLAST

fbaB / P74309: class I fructose-bisphosphate aldolase/sedoheptulose-1,7-bisphosphate aldolase monomer (EC 4.1.2.13) from Synechocystis sp.

58% id,
97% cov

PGA1_c07220: putative 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase
is similar to:
PaperBLAST

ALF_BACSU / P13243: Probable fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Bacillus subtilis

33% id,
100% cov

I3EBM6: fructose-bisphosphate aldolase (EC 4.1.2.13) from Bacillus methanolicus

33% id,
98% cov

ALF_STRR6 / P0A4S2: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Streptococcus pneumoniae

32% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory