Searching in Phaeobacter inhibens BS107 (Phaeo)
Found 4 curated entries in PaperBLAST's database that match '4.1.2.20' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query
PGA1_c31400: 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase HpcH is similar to: | PaperBLAST |
GARL_ECOLI / P23522: 5-keto-4-deoxy-D-glucarate aldolase; KDGluc aldolase; KDGlucA; 2-dehydro-3-deoxy-D-glucarate aldolase; 2-keto-3-deoxy-D-glucarate aldolase; 5-dehydro-4-deoxy-D-glucarate aldolase; Alpha-keto-beta-deoxy-D-glucarate aldolase; EC 4.1.2.20 from Escherichia coli | 45% id, 95% cov |
PGA1_c19370: 4-hydroxy-2-oxovalerate aldolase BphF is similar to: | PaperBLAST |
GARL_ECOLI / P23522: 5-keto-4-deoxy-D-glucarate aldolase; KDGluc aldolase; KDGlucA; 2-dehydro-3-deoxy-D-glucarate aldolase; 2-keto-3-deoxy-D-glucarate aldolase; 5-dehydro-4-deoxy-D-glucarate aldolase; Alpha-keto-beta-deoxy-D-glucarate aldolase; EC 4.1.2.20 from Escherichia coli | 42% id, 96% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory