Curated BLAST for Genomes


Curated BLAST

Searching in Phaeobacter inhibens BS107 (Phaeo)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Phaeobacter inhibens BS107, or try another query

PGA1_c25010: low specificity L-threonine aldolase LtaE
is similar to:

Q88R13: L-threonine aldolase (EC from Pseudomonas putida

40% id,
96% cov

PfGW456L13_1114: L-threonine aldolase (EC from Pseudomonas fluorescens

40% id,
95% cov

AO353_07670: L-threonine aldolase (EC from Pseudomonas fluorescens

39% id,
96% cov


PGA1_c09130: 8-amino-7-oxononanoate synthase BioF
is similar to:

Q9X266: L-threonine aldolase (EC from Thermotoga maritima

42% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory